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To: HUM-MOLGEN@NIC.SURFNET.NL Subject: NEWS: recent HUM-MOLGEN WWW postings From: "Frank S. Zollmann" <zoll@ovid.ukbf.fu-berlin.de> Date: Mon, 27 Mar 2000 10:34:56 +0200 This mail summarizes selected new announcements at our WWW sites: http://hum-molgen.de & http://linkage.rockefeller.edu/hum-molgen/ Thanks for your interest. Frank S. Zollmann (Editor HUM-MOLGEN) 1) LabOnWeb.com 2) Human Gene Expression Index (HuGE Index) 3) OMIM Morbid Map 4) Image Archive on the American Eugenics Movement 5) PubMed Central 6) The Multi-Dimensional Human Embryo 7) Familial Cancer Database: free software 8) Biomedical Positions To post a message go to http://hum-molgen.de/main.php3, select the appropriate topic and choose the <post new topic> option via the Quickfinder. 1) LabOnWeb.com The fresh new site LabOnWeb.com, by Compugen, is now providing a three-tiered report on expressed sequences: Genes are elongated, analyzed for expression patterns, and queried for putative function. This is a very useful service not only for those of us who run experiments and end up having many 'candidates', but also for any molecular biologist evaluating genes - this one-stop analysis gives about everything one can learn from the sequence alone. First, there is 'I-RACE' - the sequence is elongated based on the LEADS databases that Compugen has been developing since 1998. A combination of public and private domain EST and mRNA data, LEADS now represents over 70,000 unique genes. A query sequence is elongated according to the best available transcript in LEADS. Next, the expression pattern of the sequence is analyzed using SAGE - the popular method to quantify mRNA presence in libraries, based on the 3' end. Even short ESTs or incomplete sequences may have SAGE tags, and tell you allot about the possible tissues where your candidate is expressed. Then, the elongated sequence is compared for homology in a very nice and useful page, which includes comparisons all major protein, DNA, and domain databases, all neatly organized into a split-screen format with clear graphic designation of 'significance'. Last, a summary page is presented - giving you all these results, numbers, and graphs as one clear text summary of your query. Sometimes this is all you may need... Additional services, such a ORF prediction, primer design, and proprietary SAGE libraries, complete the picture of a useful, highly focused site. Currently every new user can enjoy up to 6 free searches. For more information, you may see the demo, but it is best - for additional information or in order to submit your own sequence - just to go to www.labonweb.com . To use the site just press "Join" and follow the instructions. <http://www.labonweb.com - http://hum-molgen.de/bb/Forum5/HTML/000016.html > (sponsored message) 2) Human Gene Expression Index (HuGE Index) Human Gene Expression Index (HuGE Index) aims to provide a comprehensive database to understand the expression of human genes in normal human tissues. Currently, RNA expression of more than 6000 genes is obtained using high-density oligonucleotide array technology and has been created for public access. <http://www.geneindex.org/ - http://hum-molgen.de/bb/Forum5/HTML/000015.html > 3) OMIM Morbid Map The OMIM Morbid Map, a catalog of genetic diseases and their cytogenetic map locations arranged alphabetically by disease, is now available. <http://www3.ncbi.nlm.nih.gov/Omim/searchmorbid.html - http://hum-molgen.de/bb/Forum5/HTML/000014.html > 4) Image Archive on the American Eugenics Movement The Archive includes original documents and photographs of the Eugenics movement from the early decades of the 20th century. Brief essays and captions provide context to aid understanding of the historical, social, political, and ethical issues of the time. <http://vector.cshl.org/eugenics/ - http://hum-molgen.de/bb/Forum5/HTML/000012.html > 5) PubMed Central FREE full text can now be viewed in PubMed Central, both as HTML through your web browser and as downloadable PDFs. Features include: links from article reference citations to PubMed abstracts, figures sized for on-screen viewing, and support for supplementary information such as data tables, streaming video, and high-resolution images. <http://www.pubmedcentral.nih.gov/ - http://hum-molgen.de/bb/Forum5/HTML/000011.html > 6) The Multi-Dimensional Human Embryo is a collaboration funded by the National Institute of Child Health and Human Development (NICHD) to produce and make available over the internet a three-dimensional image reference of the Human Embryo based on magnetic resonance imaging. The collection of images is intended to serve students, researchers, clinicians, and the general public interested in studying and teaching human development. <http://embryo.soad.umich.edu/ - http://hum-molgen.de/bb/Forum5/HTML/000010.html > 7) Familial Cancer Database: free software The first official version of the Familial Cancer Database (FaCD) has now been released in support of the UICC Familial Cancer and Prevention Project and can be downloaded after free registration at http://facd.uicc.org FaCD is a stand-alone Windows based computer program which may help clinicians/genetic counsellors in diagnosing hereditary cancer. It tries to match the phenotype of a cancer patient/family with the profiles of the more than 300 cancer associated familial and hereditary disorders stored in the FaCD database. FaCD is aimed at health care professionals with at least a basic knowledge of clinical cancer genetics. <http://hum-molgen.de/bb/Forum5/HTML/000009.html> 8) Biomedical Positions 1.Gene Therapy: Postdoc Sloning Biotechnology, Altomuenster, D-85250, GERMANY Dr. Octavian Schatz (drschatzo@aol.com) 2.Pharmacology and Toxicology: Postdoctoral Research on Role of Cytochrome P450 in Eye Development University of Connecticut Health Center, Farmington, CT 06030 USA Dr. John B. Schenkman (jschenkm@neuron.uchc.edu) 3.Genetics: Post-doc (male or female) Institute of Pathology, Technical University Munich, Munich, D-81675, Germany Dr. Karl-Friedrich Becker, Group Leader-Molecular Pathology (kf.becker@lrz.tum.de) 4.Others: Senior Lecturer in Health Services Research/Genetics Royal Free and University College Medical School (RFUCMS) / Great Ormond Street Hospital/Institute for Child Health (GOS-ICH) / North Central Thames Primary Care Research Network (NoCTeN), London NW3 2PF, UK Ms Gwen Pabst (g.pabst@rfc.ucl.ac.uk) 5.Cell and Molecular Biology / Anatomy: DoktorandIn FMP und Freie Universität Berlin, 10315 Berlin, Deutschland Dr. Uwe Vinkemeier (vinkemeier@fmp-berlin.de) 6.Cell and Molecular Biology / Anatomy: Postdoctoral Research on Role of Cytochrome P450 in Eye Development University of Connecticut Health Center, Farmington, CT 06030 USA Dr. John B. Schenkman (jschenkm@neuron.uchc.edu) 7.Biochemistry / Immunology: Postdoctoral Glaucoma Research University of Connecticut Health center, Farmington, CT 06030 Dr. John B. Schenkman (jschekm@neuron.uchc.edu) 8.Neurology / Neuroscience: PhD student or MD student position Dept. of Neurology, Essen, 45147, Germany Dr. Frank Wiegand (fwiegand@t-online.de) 9.Biotechnology: Synthetic Chemist GEO-CENTERS, INC., Clinton, MD 20735 Liz O'Ferrall Operations Recruiter (staffing@corp.geo-centers.com) 10.Computational Genetics / Bioinformatics: Position in computational genetics, bioinformatics support and UNIX system administration; Postdocs or Research Associates The Department of Genetics and Pathology, Uppsala University, SE-751 85 Uppsala, Sweden Jan Dumanski, Professor (jan.dumanski@cmm.ki.se) 11.Biochemistry / Immunology: Postdoctoral Fellow/Research Associate Dept. of Medicine, University of Louisville, Kentucky, Birmingham, AL 35294-0005, USA Dr. W. Zacharias (wolfgang.zacharias@ccc.uab.edu) 12.Genetics: Postdoctoral Fellow Molecular Cardiology Program, Weill Medical College of Cornell University, New York, NY 10021 Craig T. Basson, MD, PhD, Director, Molecular Cardiology (ctbasson@med.cornell.edu) 13.Microbiology / Virology: Post-doctoral fellow INSERM (French National Institue of Health Medical Research), 34095, Montpellier, France J.P. Liautard (liautard@crit.univ-montp2.fr) 14.Cell and Molecular Biology / Anatomy: Molecular Biologist-Associate Professor, Assistant Professor Boston University School of Medicine, Boston, MA 02118 Richard H. Myers, Ph.D. (rmyers@bu.edu) 15.Biochemistry / Immunology: Post Doctoral Researcher Department of Chemistry University of Kentucky, Lexington, Kentucky, 40506-0055 G. Barrett (gmabarrett@hotmail.com) 16.Computational Genetics / Bioinformatics: Computational Biologist SmithKline Beecham Pharmaceuticals, Iain.F.MacKenzie@sb.com (Iain.F.MacKenzie@sb.com) 17.Cell and Molecular Biology / Anatomy: Post-Doctoral Position Max-Delbrück-Centrum for Molecular Medicine (MDC, Berlin, Germany, D-13125 Berlin, Germany Prof. Dr. Dr. P. M. Schlag and Prof. Dr. W. Birchmeier (schlag@rrk-berlin.de) 18.Biochemistry / Immunology: laborant at laboratory of Neurophysiology Clinical Hospital #1 of Yerevan State Medical Un iversity, YEREVAN 375019, Armenia Yaghjyan Lusine (lucyagh@hragir.aua.am) 19.Pharmacology and Toxicology: Post-doctoral or Postgraduate fellow IRBM (Istituto di Ricerche di Biologia Molecolare "P. Angeletti"), 00040 Pomezia, ROMA, Italy Ph.D. GONZALEZ PAZ Odalys (gonzalez@irbm.it) 20.Cardiovascular Research: Postdoctoral Fellow Molecular Cardiology Program, Weill Medical College of Cornell University, New York, NY 10021 Craig T. Basson, MD, PhD, Director, Molecular Cardiology (ctbasson@med.cornell.edu) 21.Genetics: POST-DOCTORAL POSITION Max-Planck-Institut für Molekulare Gentik, 14195 Berlin, Germany Dr. Silke Sperling (sperling@molgen.mpg.de) 22.Biochemistry / Immunology: Molecular Biology Staff Scientist Fortune Personnel Consultants of Bend, Bend, OR 97760 Pete Seidel (pseidel@fpcbend.com) 23.Cell and Molecular Biology / Anatomy: Ph.D. student German Cancer Research Center, 69120 Heidelberg Ingrid Hoffmann, Ph.D (I.Hoffmann@DKFZ-Heidelberg.de) 24.Computational Genetics / Bioinformatics: Scientific Programmers x 4-Bio & Chem via PETE SEIDEL-Fortune Personnel Consultants, Bend, OR 97701 PETE SEIDEL (pseidel@fpcbend.com) 25.Microbiology / Virology: Post-doctoral fellow Center for AIDS Research at UCSD, La Jolla, California 92093. Dr. Juan Lama, Research Scientist (jlama@ucsd.edu) 26.Molecular Diagnostics: POST-DOCTORAL FELLOW MRC Holland, 1057 SN Amsterdam The Netherlands Dr. Jan Schouten (mrc@euronet.nl) 27.Cell and Molecular Biology / Anatomy: Post Doctoral Fellow University of Iowa, Iowa City, Iowa 52246. USA Joseph Dillon, MD (joseph-dillon@uiowa.edu) 28.Gene Therapy: PhD Student Position University Children's Hospital, 8032 Zürich, Switzerland PD Dr. Nenad Blau (blau@kispi.unizh.ch) 29.Biochemistry / Immunology: Post-doctoral fellow Bethesda, 20892, U.S.A Karen Usdin, Ph.D. (ku@helix.inh.gov) 30.Cancer Research: POST-DOCTORAL POSITION UNIVERSITY OF CALIFORNIA-SAN DIEGO CANCER CENTER, La Jolla, CA 92093-0684 Dr. Virginia Urquidi (vurquidi@ucsd.edu) 31.Neurology / Neuroscience: Post-Doctoral Fellow National Institutes of Health, Bethesda, Maryland 20892-4480, USA Dr. Douglas E. Brenneman (dbrenn@codon.nih.gov) 32.Genetics: Post-doctoral fellow Department of Ophthalmology and Visual Sciences, Ann Arbor, MI 48105, USA. Radha Ayyagari (ayyagari@umich.edu) 33.Cell and Molecular Biology / Anatomy: PhD in molecular biology seeking a R&D position 34.Biochemistry / Immunology: POST-DOCTORAL FELLOW University of Virginia School of Medicine, Charlottesville, VA 22908 USA Adam Goldfarb, Associate Professor (ang3x@virginia.edu) 35.Biochemistry / Immunology: Occupationa/Environmental Scientist GEO-CENTERS, INC., Rockville, MD 20852, USA Linda Dennis/Julie Shelton (staffing@corp.geo-centers.com) 36.Cell and Molecular Biology / Anatomy: Postdoctoral Research Associate University of Illinois, Chicago, IL 60612 Gail Prins, PhD, Associate Professor (gprins@uic.edu) 37.Computational Genetics / Bioinformatics: Bioinformatics Programmer UC Davis, Davis, CA, USA 95616 UC Davis Employment Office ( jobs@ucdavis.edu) 38.Genetics: Postdoctoral Scientist http://www.ohsu.edu/som-MedGen/genpage.htm, Portland, OR 97201, USA Markus Grompe, M.D. (grompem@ohsu.edu) 39.Cancer Research: POST-DOCTORAL FELLOW DANA-FARBER CANCER INSTITUTE, Boston, MA 02115, USA Kornelia Polyak, Assistant Professor of Medicine (Kornelia_Polyak@dfci.harvard.edu) 40.Cell and Molecular Biology / Anatomy: Post-doctoral fellow or senior technician University of Rochester Medical Center, Rochester, NY 14642 USA Paul D. Coleman, Professor (paul_coleman@urmc.rochester.edu) 41.Cell and Molecular Biology / Anatomy: senior technician University of Rochester Medical Center, Rochester, NY 14642 USA Paul D. Coleman, Professor (paul_coleman@urmc.rochester.edu) 1. http://hum-molgen.de/positions/postdocs/1236.html 2. http://hum-molgen.de/positions/postdocs/1235.html 3. http://hum-molgen.de/positions/postdocs/1249.html 4. http://hum-molgen.de/positions/assistant/0095.html 5. http://hum-molgen.de/positions/predoctoral/0217.html 6. http://hum-molgen.de/positions/postdocs/1234.html 7. http://hum-molgen.de/positions/postdocs/1233.html 8. http://hum-molgen.de/positions/predoctoral/0216.html 9. http://hum-molgen.de/positions/non_academic_positions/0407.html 10. http://hum-molgen.de/positions/postdocs/1232.html 11. http://hum-molgen.de/positions/postdocs/1231.html 12. http://hum-molgen.de/positions/postdocs/1230.html 13. http://hum-molgen.de/positions/postdocs/1226.html 14. http://hum-molgen.de/positions/assistant/0094.html 15. http://hum-molgen.de/positions/postdocs/1224.html 16. http://hum-molgen.de/positions/non_academic_positions/0415.html 17. http://hum-molgen.de/positions/postdocs/1225.html 18. http://hum-molgen.de/positions/predoctoral/0215.html 19. http://hum-molgen.de/positions/postdocs/1228.html 20. http://hum-molgen.de/positions/postdocs/1229.html 21. http://hum-molgen.de/positions/postdocs/1246.html 22. http://hum-molgen.de/positions/non_academic_positions/0413.html 23. http://hum-molgen.de/positions/predoctoral/0214.html 24. http://hum-molgen.de/positions/non_academic_positions/0414.html 25. http://hum-molgen.de/positions/postdocs/1227.html 26. http://hum-molgen.de/positions/postdocs/1208.html 27. http://hum-molgen.de/positions/postdocs/1239.html 28. http://hum-molgen.de/positions/predoctoral/0213.html 29. http://hum-molgen.de/positions/postdocs/1219.html 30. http://hum-molgen.de/positions/postdocs/1220.html 31. http://hum-molgen.de/positions/postdocs/1237.html 32. http://hum-molgen.de/positions/postdocs/1238.html 33. http://hum-molgen.de/positions/wanted/0185.html 34. http://hum-molgen.de/positions/postdocs/1240.html 35. http://hum-molgen.de/positions/postdocs/1241.html 36. http://hum-molgen.de/positions/postdocs/1242.html 37. http://hum-molgen.de/positions/non_academic_positions/0416.html 38. http://hum-molgen.de/positions/postdocs/1243.html 39. http://hum-molgen.de/positions/postdocs/1244.html 40. http://hum-molgen.de/positions/postdocs/1245.html 41. http://hum-molgen.de/positions/non_academic_positions/0417.html If you want to "switch off" the NEWS-TOPIC, send SET HUM-MOLGEN TOPICS: -NEWS to LISTSERV@NIC.SURFNET.NL (not to HUM-MOLGEN itself) --
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