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virtual library in human genetics and molecular biology

GenBank

Dennis A. Benson , Mark Boguski , David J. Lipman and James Ostell

Pages 1-5



The European Bioinformatics Institute (EBI) databases

Patricia Rodriguez-Tomé , Peter J. Stoehr , Graham N. Cameron and Tomas P. Flores

Pages 6-13



The Genome Sequence DataBase (GSDB): meeting the challenge of genomic sequencing

Gifford Keen , Jillian Burton , David Crowley , Emily Dickinson , Ada Espinosa-Lujan , Ed Franks , Carol
Harger , Mo Manning , Shelley March , Mia McLeod , John O'Neill , Alicia Power , Maria Pumilia , Rhonda
Reinert , David Rider , John Rohrlich , Jolene Schwertfeger , Linda Smyth , Nina Thayer , Charles Troup and
Chris Fields

Pages 13-16



The PIR-International Protein Sequence Database

David G. George , Winona C. Barker , Hans-Werner Mewes , Friedhelm Pfeiffer and Akira Tsugita

Pages 17-21



The SWISS-PROT protein sequence data bank and its new supplement TREMBL

Amos Bairoch and Rolf Apweiler

Pages 21-25



The metabolic pathway collection from EMP: the enzymes and metabolic pathways database

Evgeni Selkov , Svetlana Basmanova , Terry Gaasterland , Igor Goryanin , Yuri Gretchkin , Natalia Maltsev ,
Valeri Nenashev , Ross Overbeek , Elena Panyushkina , Lyudmila Pronevitch , Evgeni Selkov, Jr and Ilya Yunus

Pages 26-29



Compilation of DNA sequences of Escherichia coli K12 (ECD and ECDC; update 1995)

Manfred Kröger and Ralf Wahl

Pages 29-32



EcoCyc: an encyclopedia of Escherichia coli genes and metabolism

Peter D. Karp , Monica Riley , Suzanne M. Paley and Alida Pelligrini-Toole

Pages 32-40



Genes and proteins of Escherichia coli (GenProtEc)

Monica Riley and David B. Space

Pages 40-40



NRSub: a non-redundant database for Bacillus subtilis

Guy Perrière , Ivan Moszer and Takashi Gojobori

Pages 41-45



YPD-A database for the proteins of Saccharomyces cerevisiae

James I. Garrels

Pages 46-49



LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding
sequences and its associated homology databases from the yeast Saccharomyces

Reinhard Dölz , Marie-Odile Mossé , Piotr P. Slonimski , Amos Bairoch and Patrick Linder

Pages 50-52



FlyBase: the Drosophila database

The FlyBase Consortium

Pages 53-56



Improvements to the GDB tm Human Genome Data Base

Kenneth H. Fasman , Stanley I. Letovsky , Robert W. Cottingham and David T. Kingsbury

Pages 57-63



Molecular probe data base (MPDB)

Maria Giuseppina Campi , Paolo Romano , Edward Thüroff , Paola Visconti , M. Assunta Manniello , Beatrice
Iannotta , Gabriella Rondanina , Francesco Molina , Tiziana Ruzzon and Leonardo Santi

Pages 64-67



Compilation of tRNA sequences and sequences of tRNA genes

Mathias Sprinzl , Clemens Steegborn , Frank Hübel and Sergey Steinberg

Pages 68-72



Small RNA database

Jian Gu and Ram Reddy

Pages 73-75



The uRNA database

Christian Zwieb

Pages 76-79



The Signal Recognition Particle Database (SRPDB)

Niels Larsen and Christian Zwieb

Pages 80-81



The Ribosomal Database Project (RDP)

Bonnie L. Maidak , Gary J. Olsen , Niels Larsen , Ross Overbeek , Michael J. McCaughey and Carl R. Woese

Pages 82-85



Database on the structure of small ribosomal subunit RNA

Yves Van de Peer , Stefan Nicolaï , Peter De Rijk and Rupert De Wachter

Pages 86-91



Database on the structure of large ribosomal subunit RNA

Peter De Rijk , Yves Van de Peer and Rupert De Wachter

Pages 92-97



The RNA modification database

Pamela F. Crain and James A. McCloskey

Pages 98-99



The haemophilia A mutation search test and resource site, home page of the factor VIII
mutation database: HAMSTeRS

Adam I . Wacey , Geoffrey Kemball-Cook , Haig H. Kazazian , Stylianos E. Antonarakis , Rainer Schwaab ,
Peter Lindley 5,w and E. G. D. Tuddenham

Pages 100-103



Haemophilia B (sixth edition): a database of point mutations and short additions and deletions

F. Giannelli , P. M. Green , S. S. Sommer , M.-C. Poon , M. Ludwig , R. Schwaab , P. H. Reitsma , M.
Goossens , A. Yoshioka and G. G. Brownlee

Pages 103-119



Databases and software for the analysis of mutations in the human p53 gene, the human hprt
gene and the lacZ gene in transgenic rodents

Neal F. Cariello , George R. Douglas and Thierry Soussi

Pages 119-120



APC gene: database of germline and somatic mutations in human tumors and cell lines

Christophe Béroud and Thierry Soussi1 ,

Pages 121-124



Database of mutations that alter the large tumor antigen of simian virus 40

Timothy D. Kierstead and James M. Pipas

Pages 125-127



PAH Mutation Analysis Consortium Database: a database for disease-producing and other
allelic variation at the human PAH locus

Liem Hoang , Susan Byck , Lynne Prevost and Charles R. Scriver (curators)

Pages 127-132



A cholinesterase genes server (ESTHER): a database of cholinesterase-related sequences for
multiple alignments, phylogenetic relationships, mutations and structural data retrieval

Xavier Cousin , Thierry Hotelier , Philippe Liévin , Jean-Pierre Toutant and Arnaud Chatonnet

Pages 132-137



Software and database for the analysis of mutations in the human FBN1 gene

Gwenaëlle Collod , Christophe Béroud , Thierry Soussi , Claudine Junien and Catherine Boileau

Pages 137-141



Somatic point mutations in the p53 gene of human tumors and cell lines: updated compilation

M. Hollstein , B. Shomer , M. Greenblatt , T. Soussi , E. Hovig , R. Montesano and C.C. Harris

Pages 141-146



p53 gene mutation: software and database

Christophe Béroud , Frédérique Verdier and Thierry Soussi

Pages 147-150



The androgen receptor gene mutations database

Bruce Gottlieb , Mark Trifiro , Rose Lumbroso , D. Marie Vasiliou and Leonard Pinsky 1,2-4

Pages 151-154



The glucocorticoid receptor resource

Mark Danielsen and Elisabeth Martinez

Pages 155-156



Protein C deficiency: summary of the 1995 database update

Pieter H. Reitsma

Pages 157-159



BTKbase, mutation database for X-linked agammaglobulinemia (XLA)

Mauno Vihinen , Tsutomu Iwata , Christine Kinnon , Sau-Ping Kwan , Hans D. Ochs , Igor Vorechovsky and C.
I. Edvard Smith

Pages 160-166



The 16S ribosomal RNA mutation database (16SMDB)

Kathleen L. Triman

Pages 166-168



The 23S Ribosomal RNA Mutation Database (23SMDB)

Kathleen L. Triman

Pages 169-171



A general database for DNA sequence changes induced by mutagenesis of several bacterial and
mammalian genes

Franklin Hutchinson and J. Edward Donnellan, Jr

Pages 172-176



MITOMAP: a human mitochondrial genome database

Andreas M. Kogelnik , Marie T. Lott , Michael D. Brown , Shamkant B. Navathe and Douglas C. Wallace

Pages 177-179



The SWISS-2DPAGE database of two-dimensional polyacrylamide gel electrophoresis, its status
in 1995

Ron D. Appel , Jean-Charles Sanchez , Amos Bairoch , Olivier Golaz , Florence Ravier , Christian Pasquali ,
Graham J. Hughes and Denis F. Hochstrasser

Pages 180-182



Progress with the PRINTS protein fingerprint database

T. K. Attwood , M. E. Beck , A. J. Bleasby , K. Degtyarenko and D. J. Parry Smith

Pages 182-189



The PROSITE database, its status in 1995

Amos Bairoch , Philipp Bucher and Kay Hofmann

Pages 189-196



The Blocks database-a system for protein classification

Shmuel Pietrokovski , Jorja G. Henikoff and Steven Henikoff

Pages 197-201



The HSSP database of protein structure-sequence alignments

Reinhard Schneider and Chris Sander

Pages 201-205



The FSSP database: fold classification based on structure-structure alignment of proteins

Liisa Holm and Chris Sander

Pages 206-210



The SBASE protein domain library, Release 4.0: a collection of annotated protein sequence
segments

János Murvai , Andrei Gabrielian , Péter Fábián , Zsolt Hátsági , Kirill Degtyarenko , Hedvig Hegyi and Sándor
Pongor

Pages 210-214



Codon usage tabulated from the international DNA sequence databases

Yasukazu Nakamura , Ken-nosuke Wada , Yoshiko Wada , Hirofumi Doi , Shigehiko Kanaya , Takashi
Gojobori and Toshimichi Ikemura

Pages 214-215



TransTerm: a database of translational signals

Mark E. Dalphin , Chris M. Brown , Peter A. Stockwell and Warren P. Tate

Pages 216-218



GRBase, a database linking information on proteins involved in gene regulation

Bruce Collier and Mark Danielsen

Pages 219-220



The ENZYME data bank in 1995

Amos Bairoch

Pages 221-222



REBASE-restriction enzymes and methylases

Richard J. Roberts and Dana Macelis

Pages 223-236



The Ribonuclease P Database

James W. Brown

Pages 236-238



TRANSFAC: a database on transcription factors and their DNA binding sites

E. Wingender , P. Dietze , H. Karas and R. Knüppel

Pages 238-241



MHCPEP-a database of MHC-binding peptides: update 1995

Vladimir Brusic , George Rudy , Anthony P. Kyne and Leonard C. Harrison

Pages 242-244



Histone Sequence Database: a compilation of highly-conserved nucleoprotein sequences

Andreas D. Baxevanis and David Landsman

Pages 245-247



O-GLYCBASE: a revised database of O -glycosylated proteins

Jan E. Hansen , Ole Lund , Jens O. Nielsen , John-E. S. Hansen and Søren Brunak

Pages 248-252

Nucleic Acids Research is published 25 times a year by Oxford University Press.

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