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virtual library in human genetics and molecular biology

Oxford University Press

oligonucleotide duplexes induced by
site-specific covalent benzo[a]pyrene diol
epoxide-guanine lesions
Rong Xu, Bing Mao, Jing Xu, Bin Li, Sheryl
Birke, Charles E. Swenberg and Nicholas E.
Geacintov

DNase I-hypersensitive sites in the chromatin
of rat growth hormone gene locus and enhancer
activity of regions with these sites
Akira Aizawa, Tadashi Yoneyama, Koji
Kazahari and Masao Ono

Characterization of a glucocorticoid
responsive element and identification of an
AT-rich element that regulate the link
protein gene
Craig Rhodes and Yoshihiko Yamada

Molecular cloning of LSIRF, a
lymphoid-specific member of the interferon
regulatory factor family that binds the
interferon-stimulated response element (ISRE)
Toshifumi Matsuyama, Alex Grossman,
Hans-Willi Mittrucker, David P. Siderovski,
Friedemann Kiefer, Takatoshi Kawakami,
Christopher D. Richardson, Tadatsugu
Taniguchi, Steven K. Yoshinaga and Tak W.
Mak

Fluorescent dye-primer cycle sequencing using
unpurified PCR products as templates;
development of a protocol amenable to
high-throughput DNA sequencing
Michael K. Trower, Doreen Burt, Ian J.
Purvis, Colin W. Dykes and Chris
Christodoulou

Stability of lac repressor-operator complexes
in a new agarose-based gel matrix
Karen M. Vossen and Michael G. Fried

Structural and functional characterization of
the promoter regions of the NFKB2 gene
Luigia Lombardi, Paolo Ciana, Catarina
Cappellini, Dino Trecca, Luisa Guerrini,
Anna Migliazza, Anna Teresa Maiolo and
Antonino Neri

Polyamine effects on purine-purine-pyrimidine
triple helix formation by phosphodiester and
phosphorothioate oligodeoxyribonucleotides
Marco Musso and Michael W. Van Dyke

Mammalian assay for site-specific DNA damage
processing using the human H-ras
proto-oncogene
Loretta Arcangeli and Kandace J. Williams

The Xenopus 9 bp ribosomal terminator (T3
box) is a pause signal for the RNA polymerase
I elongation complex
Paul Labhart

Human helicase gene SKI2W in the HLA class
III region exhibits striking structural
similarities to the yeast antiviral gene SKI2
and to the human gene KIAA0052: emergence of
a new gene family
Andrew W. Dangel, Liming Shen, Anna R.
Mendoza, Lai-chu Wu and C. Yung Yu

The interaction of DNA duplexes containing
2-aminopurine with restriction endonucleases
EcoRII and SsoII
O. V. Petrauskene, S. Schmidt, A. S.
Karyagina, I. I. Nikolskaya, E.S. Gromova
and D. Cech

Autoregulation of poly(A) binding protein
synthesis in vitro
Osvaldo P. de Melo Neto, Nancy Standart
and Cezar Martins de Sa

The DNA repair genes RAD54 and UNG1 are cell
cycle regulated in budding yeast but MCB
promoter elements have no essential role in
the DNA damage response
Leland H. Johnston and Anthony L. Johnson

Stereochemical basis of DNA bending by
transcription factors
Masashi Suzuki and Naoto Yagi

Triple helix DNA alters nucleosomal
histone-DNA interactions and acts as a
nucleosome barrier
Lorelei Westin, Patrik Blomquist, John F.
Milligan and Orjan Wrange

Human DNA polymerase epsilon is expressed during
cell proliferation in a manner characteristic
of replicative DNA polymerases
Jussi Tuusa, Lahja Uitto and Juhani E.
Syvaoja

ZEMa, a member of a novel group of MADS box
genes, is alternatively spliced in maize
endosperm
Katharina Montag, Francesco Salamini and
Richard D. Thompson

DNA binding and regulatory effects of
transcription factors SP1 and USF at the rat
amyloid precursor protein gene promoter
Peter W. Hoffman and Jeffrey M. Chernak

Relative stabilities of DNA three-way,
four-way and five-way junctions (multi-helix
junction loops): unpaired nucleotides can be
stabilizing or destabilizing
Julie L. Kadrmas, Amy J. Ravin and Neocles
B. Leontis

Improved accumulation and activity of
ribozymes expressed from a tRNA-based RNA
polymerase III promoter
James D. Thompson, David F. Ayers, Terra A.
Malmstrom, Timothy L. McKenzie, Louis
Ganousis, Bharat M. Chowrira, Larry Couture
and Dan T. Stinchcomb

cIRF-3, a new member of the interferon
regulatory factor (IRF) family that is
rapidly and transiently induced by dsRNA
Caroline E. Grant, Monika Z. Vasa, and Roger
G. Deeley

Solution structure of a DNA hairpin and its
disulfide cross-linked analog
Robert J. Cain, Erik R. P. Zuiderweg and
Gary D. Glick

Gram-scale purification of phosphorothioate
oligonucleotides using ion-exchange
displacement chromatography
Joseph A. Gerstner, Paula Pedroso, Joseph
Morris and B. John Bergot

SSCP primer design based on single-strand DNA
structure predicted by a DNA folding program
David A. Nielsen, Alexey Novoradovsky and
David Goldman

Transcription and processing of the rodent ID
repeat family in germline and somatic cells
Joomyeong Kim, David H. Kass and Prescott
L. Deininger

Ribozyme-mediated RNA degradation in nuclei
suspension
Olaf Heidenreich, Shin-Heh Kang, David A.
Brown, Xiao Xu, Piotr Swiderski, John J.
Rossi, Fritz Eckstein and Michael
Nerenberg

Analysis of the Escherichia coli genome VI:
DNA sequence of the region from 92.8 through
100 minutes
Valerie Burland, Guy Plunkett III, Heidi J.
Sofia, Donna L. Daniels and Frederick R.
Blattner

Gram-scale purification of phosphorothioate
oligonucleotides using ion-exchange
displacement chromatography
Joseph A. Gerstner, Paula Pedroso, Joseph
Morris and B. John Bergot

SSCP primer design based on single-strand DNA
structure predicted by a DNA folding program
David A. Nielsen, Alexey Novoradovsky and
David Goldman

Transcription and processing of the rodent ID
repeat family in germline and somatic cells
Joomyeong Kim, David H. Kass and Prescott
L. Deininger

Ribozyme-mediated RNA degradation in nuclei
suspension
Olaf Heidenreich, Shin-Heh Kang, David A.
Brown, Xiao Xu, Piotr Swiderski, John J.
Rossi, Fritz Eckstein and Michael
Nerenberg

Analysis of the Escherichia coli genome VI:
DNA sequence of the region from 92.8 through
100 minutes
Valerie Burland, Guy Plunkett III, Heidi J.
Sofia, Donna L. Daniels and Frederick R.
Blattner

Transcription of the human transferrin gene
in neuronal cells
Bassel E. Sawaya and Evelyne Schaeffer

A family of cold-regulated RNA-binding
protein genes in the cyanobacterium Anabaena
variabilis M3
Naoki Sato

Molecular cloning of cDNA encoding mouse
Cdc21 and CDC46 homologs and characterization
of the products: physical interaction between
P1(MCM3) and CDC46 proteins
Hiroshi Kimura, Nanako Takizawa, Nobuo
Nozaki and Kazunori Sugimoto

A new affinity purification procedure for
DNA-binding proteins using bromoacetyl
agarose
Shin-Heh Kang, Xiao Xu, Olaf Heidenreich,
Sergei Gryaznov and Michael Nerenberg

Dexamethasone inducible gene expression
optimised by glucocorticoid antagonists
Wolfgang Mikulits, Doris Chen and Ernst W.
Mullner

Chasing dideoxy-mediated sequencing reactions
with terminal deoxynucleotidyl transferase
may result in nucleotide inversions in
sequencing gels
Claire Simard and Isabelle Langlois

Improved phenol enhanced DNA reassociation
technique (PERT) using thermal cycling
Robert D. Miller and Roy Riblet

Increasing the size of PCR products without
redesigning primer binding sequences
Brian J. McKeown and Romelle Piercy

The effect of base mismatches in the
substrate recognition helices of hammerhead
ribozymes on binding and catalysis
Martina Werner and Olke C. Uhlenbeck

Phylogenetic analysis of Leishmania RNA virus
and Leishmania suggests ancient
virus-parasite association
Giovanni Widmer and Sheryl Dooley

Functional domains of the heavy
metal-responsive transcription regulator
MTF-1
Freddy Radtke, Oleg Georgiev, Hans-Peter
Muller, Enrico Brugnera and Walter Schaffner

Nucleic Acids Research is published 25 times a year by Oxford University
Press.

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