posted 09-29-2002 06:57 PM         

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BASE is a comprehensive database server to manage the massive amounts of data generated by microarray analysis. In short, it manages biomaterial information, raw data and images, and provides integrated and "plug-in"-able normalization, data viewing and analysis tools. Additionally, for labs that make their own in-house arrays or for labs that wish to track probe information, the system also has array production LIMS features which can be integrated with the data analysis. The organization and interface of BASE was designed to closely follow the natural work-flow of the microarray biologist, and is compatible with most types of array platforms and datatypes (e.g. cDNA/oligos spotted on any substrate, Affymetrix, CGH on arrays, etc).

WWW: http://base.thep.lu.se/

Saal et al. BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data. Genome Biology 2002 3(8): software0003.1-0003.6

IP: 160.45.191.12

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