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bio-quick links
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top | BioSearch - BioInformatics - Organisms

Newsgroups
Bio:
bionet, dejaNews


Medline
(NIH) PubMed - FAQ


GENEATLAS



Genecard

see also GDB


NIH/Entrez


BioHunt

ExPASy

And Or Adj. Free 


MedHunt
H
ealth On the Net Foundation


(medical resources on the internet)


OMD
Gray-lab's
"On-line Medic. Dict."


FlyBase
EBI/UK - Indiana


SaccDB


MouseGD

Name:
Symbol:


top | BioSearch - BioInformatics - Organisms

NewsGroups
dejaNews: bionet
bio-software
bio-www


News from
EBI: BioInformer
EMBNet: news
ExPaSy: Swiss-Flash
NCBI: whats new
NCBI: Newsletter


hot links
Amos Bairoch
BioToolKit
Biolinks.com





Starting sites
EMBnet.CH /Svcs - ISREC - Geneva
EBI/Services - Sanger Center
Baylor (BCM)
NCBI [search]
Nobel Prices 97 - GeneCards

Journals
lists: Beasley /1/2 - SJO - eJournals
Abbrev. of Jn: L. Hough's list - @expasy
Cell - Science - Nature/GB, US
Genes Dev. - EMBO J. - Development, Neuron, CMLS (Experientia)
JBC, NAR, PNAS ,JMB, MCB,
BioAssays , Technical Tips Online

Get a sequence (find and fetch it)
NIH: Entrez: Nucleic Acid - Protein
NIH: Genomes - Taxonomy
NIH: UniGene (human mRNA/EST)
SRS: Hinxton - Heidelbg
NDB: Rutgers, SDSC, EBI 
     (nucleic acid database)
GSDB: Maestro
Weizmann: GeneCards

Tools
PCR forum

Databases: Amos Bairoch's list
explained:
: prot , nucl.acid

DNA Databases
NIH: Genbank(NIH/NCBI)
NIH: OMIM - online mendelian
     inheritance in man
GDB - genome database
GSDB - genome sequence database
HGMD - Human Gene Mutation database
TIGR -

Protein Databases
Swissprot - PIR - MIPS - PDB, ATLAS, OWL(UK), OWL(US) /alt

Similarity&Homology Searches:
(Blast, Fasta, Smith-Waterman)

EBI: tools - blast2, fasta3, S-W
EMBNet.CH: WU-blast
NIH: blast, blast2, PSI-blast, Cognitor 
B
aylor College Medecine: pep - dna 
Indiana, IUBIO: species - keywords 
Stanford, Arabidopsisblast - fasta 
Stanford,Yeastblast - fasta 
Berkeley, Drosophila:: blast
EBI, Drosophila: blast

Multiple Sequence Aligment
EBI: clustalw
BCM: 2x - many
WUSTL: 8x500 MSA
Processsing of MSAs
Boxshade (shading aligned sequences)

DNA Motifs
Binding sites: GSF/Transfac, TESS
Promoter: PromoterScan, NIH/Signalscan
Gene prediction: genscan/alt, BCM_gene_finder, genie
Repetitive sequences: Repeat masker2

Protein Motifs
ProDom/FR ProDom/UK,
ProfileScan, Pfam, Prosite
Pratt Bergen, EBI, Pasteur
GeneFIND & ProClass
    PIR, Swissprot: protein classes
COG (clusters of orthologous groups)
      Cognitor (blast against COG)
NDB: Structure Finder 
Heidelberg: Predict protein
ExPaSy: Swiss-Model

Dictionaries
Cell Biology , Biotech , Glossary

Help
GCG: access (register)
EGCG: EMBNetCH, EBI, IGBMC
BioComputing: EMBNet: CH, GB, DK

top | BioSearch - BioInformatics - Organisms

Bio.net
Drosophila
Drososphila Labs
Switzerland
France
USA & world

Drosophila - more links
FlyBase: EBI (UK ) - Indiana - Harvard - ||old-style: Australia - France - Israel - Japan 
Information: The InteractiveFly[search], Virtual Library, VectorDB - (Knife)
Information: P-elements 
Genome Project:Berkeley: BDGP, EofD, blast
Genome Project:EBI: EDGP , blast | DM in Swissprot
Protocols: Gerard Manning's
 

Bio.net
YEAST

Yeast - more links
Stanford: SGD [search] blast fasta , Sacc._VL - Yeast_VL 
Sanger Center: S. Pombe /blast , S. cerevisiae /blast 
MIPS: pedant 
Other: YPD home - Yeast@MIPS - Yeast in Swissprot 

Bio.net
Celegans
Newsgroup
swmed.edu

C. elegans
Entry: C. elegans virtual library - Labs 
AceDB at: Sanger - NAL - ZIA 
BLAST at: Sanger , St. Louis 

Bio.net
Zebrafish

Zebrafish
Zebrafish net: FR, JP, US 

Bio.net
chromosomes
genestructure
humanGenomeProject

Human see: medical links 
 

Mouse
Mouse Genome Informatics: UK, FR, US, JP 

Bio.net
Plants
Arabidopsis
maize

Plants/Arabidopsis - more links
AIMS - ATGC - AtDB [search] - Arabinet 
Gene Expression 
Nottingham Stockcenter - WeedsWorld 

 

 
 

BioLinks by Thomas Gutjahr.
Logo and Logo Images by Art for BioMed / Syrinx GmbH - Frankfurt / Germany.
4.0 (c) 1995-98 HUM-MOLGEN. All rights reserved. Liability and Copyright.